Optically active bisbibenzyls from Bazzania trilobata: isolation and stereochemical analysis by chromatographic, chiroptical, and computational methods

Bazzanin S, a new chlorinated bisbibenzyl of the isoplagiochin D type, as well as isoplagiochin D itself were isolated from the liverwort Bazzania trilobata. The structure of bazzanin S was elucidated based on extensive NMR spectral evidence and by mass spectrometry. Both macrocyclic compounds, bazzanin S and isoplagiochin D, as well as previously reported bazzanins exhibit optical activity, but are not enantiopure in nature. The enantiomeric ratios of a broad array of different cyclic bisbibenzyls, isoplagiochin D, bazzanins A-C and F-J, and bazzanin S, were determined by HPLC on a chiral phase. Exemplarily for the halogen-free parent compound isoplagiochin D, elucidation of the absolute configuration was achieved by quantum chemical CD calculations.     

Advancing understanding of actinide(iii) (Ac,Am, Cm) aqueous complexation chemistry

The positive impact of having access to well-defined starting materials for applied actinide technologies – and for technologies based on other elements – cannot be overstated. Of numerous relevant 5f-element starting materials, those in complexing aqueous media find widespread use. Consider acetic acid/acetate buffered solutions as an example. These solutions provide entry into diverse technologies, from small-scale production of actinide metal to preparing radiolabeled chelates for medical applications. However, like so many aqueous solutions that contain actinides and complexing agents, 5f-element speciation in acetic acid/acetate cocktails is poorly defined. Herein, we address this problem and characterize Ac³⁺ and Cm³⁺ speciation as a function of increasing acetic acid/acetate concentrations (0.1 to 15 M, pH = 5.5). Results obtained via X-ray absorption and optical spectroscopy show the aquo ion dominated in dilute acetic acid/acetate solutions (0.1 M). Increasing acetic acid/acetate concentrations to 15 M increased complexation and revealed divergent reactivity between early and late actinides. A neutral Ac(H₂O)₆₍₁₎(O₂CMe)₃₍₁₎ compound was the major species in solution for the large Ac³⁺. In contrast, smaller Cm³⁺ preferred forming an anion. There were approximately four bound O₂CMe¹⁻ ligands and one to two inner sphere H₂O ligands. The conclusion that increasing acetic acid/acetate concentrations increased acetate complexation was corroborated by characterizing (NH₄)₂M(O₂CMe)₅ (M = Eu³⁺, Am³⁺ and Cm³⁺) using single crystal X-ray diffraction and optical spectroscopy (absorption, emission, excitation, and excited state lifetime measurements).

Actinide complexation from aqueous acetic acid/acetate buffered solutions is described. The number of water ligands was directly correlated with the acetate concentration and characterized by X-ray absorption and optical spectroscopy.     

Synthesis and characterization of silica/poly (methyl methacrylate) nanocomposite latex particles through emulsion polymerization using a cationic azo initiator

Following a previous work (J. L. Luna-Xavier et al., Colloid Polym. Sci.279, 947 (2001)), silica-poly (methyl methacrylate) (PMMA) nanocomposite latex particles have been synthesized in emulsion polymerization using a cationic initiator, 2,2'-azobis (isobutyramidine) dihydrochloride (AIBA), and a nonionic polyoxyethylenic surfactant (NP30). Silica beads with diameters of 68, 230, and 340 nm, respectively, were used as the seed. Coating of the silica particles with PMMA was taking place in situ during polymerization, resulting in the formation of colloidal nanocomposites with a raspberry-like or a core-shell morphology, depending on the size and nature of the silica beads. The amount of surface polymer was quantified by means of ultracentrifugation and thermogravimetric analysis as extensively described in the first article of the series (see above reference). The influence of some determinant parameters such as the pH of the suspension, the initiator, silica, monomer, or surfactant concentration on the amount of coating polymer and on the efficiency of the coating reaction was investigated in details and discussed in light of the physicochemical properties of the seed mineral. Electrostatic attraction between the positive end groups of the macromolecules and the inorganic surface proved to be the driving force of the polymer assembly on the seed surface at high pH, while polymerization in adsorbed surfactant bilayers (so-called admicellar polymerization) appeared to be the predominant mechanism of coating at lower pH. Optimal conditions have been found to reach high encapsulation efficiencies and to obtain a regular polymer layer around silica.     

Mapping the cooperativity pathways in spin crossover complexes

Crystal packing energy calculations are applied to the [Fe(PM-L)₂(NCS)₂] family of spin crossover (SCO) complexes (PM-L = 4-substituted derivatives of the N-(2-pyridylmethylene)-4-aminobiphenyl ligand) with the aim of relating quantitatively the cooperativity of observed SCO transitions to intermolecular interactions in the crystal structures. This approach reveals a linear variation of the transition abruptness with the sum of the magnitudes of the interaction energy changes within the first molecular coordination sphere in the crystal structure. Abrupt transitions are associated with the presence of significant stabilising and destabilising changes in intermolecular interaction energies. While the numerical trend established for the PM-L family does not directly extend to other classes of SCO complex in which the intermolecular interactions may be very different, a plot of transition abruptness against the range of interaction energy changes normalised by the largest change shows a clustering of complexes with similar transition abruptness. The changes in intermolecular interactions are conveniently visualised using energy difference frameworks, which illustrate the cooperativity pathways of an SCO transition.

The abruptness of spin crossover (SCO) is related to intermolecular energy changes occurring over the course of an SCO transition. Crossover is abrupt when SCO-induced strain is accommodated synergistically in a few key interactions.     

Cyan fluorescent protein: molecular dynamics, simulations, and electronic absorption spectrum

The dynamics and electronic absorption spectrum of enhanced cyan fluorescent protein (ECFP), a mutant of green fluorescent protein (GFP), have been studied by means of a 1 ns molecular dynamics (MD) simulation. The two X-ray conformations A' and B' of ECFP were considered. The chromophore was assumed to be neutral, and all titratable residues were taken in their standard protonation state at neutral pH. The protein was embedded in a box of water molecules (and counterions). The first result is that the two conformations A' and B' are found to be stable all along the simulation. Then, an analysis of the hydrogen-bond networks shows strong differences between the two conformations in the surroundings of the nitrogen atom of the indolic part of the chromophore. This is partly due to the imperfection in the beta barrel near the His148 residue, which allows the access of one solvent molecule inside the protein in conformation A'. Finally, quantum mechanical calculations of the electronic transition energies of the chromophore in the charge cloud of the protein and solvent water molecules were performed using the TDDFT method on 160 snapshots extracted every 5 ps of the MD trajectories. It is found that conformations A' and B' exhibit very similar spectra despite different H-bond networks involving the chromophore. This similarity is related to the weak charge transfer involved in the electronic transition and the weak electrostatic field created by ECFP near the chromophore, within the hypotheses made in the present simulation.     

Design and synthesis of a Mn(III)-porphyrin steroid conjugate used as a new cleavable affinity label: on the road to semi-synthetic catalytic antibodies

We here report the synthesis of a novel porphyrin-steroid conjugate which was designed for the site-specific incorporation of a non-natural heme cofactor at the binding site of an anti-estradiol antibody, in order to get a semi-synthetic catalytic antibody with a monooxygenase-like activity. The general strategy involved a coupling reaction between a testosterone modified by an arm bearing a cleavable disulfide bridge and a meso-tetraarylporphyrin bearing two successive meso-ortho-substituted-phenyl rings, α,α-5,10-bis-[{o-(2-carboxyethyl)carboxamido}phenyl]-15,20-diphenyl-porphyrin. The final porphyrin-steroid conjugate was successfully purified and fully characterized, and was subsequently metalated with manganese acetate. The metalloporphyrin moiety will be used to be coupled with the antibody to generate a new biocatalyst with monooxygenase-like activities.     

Stability constants of At(I)-complexes with thiourea,iodide and mixed ligands in ethanol and water

The ion mobilities of [²¹¹At] At(I) in dependence on thiourea (tu) concentration, iodide concentration and a mixture of both ligands were measured by the electromigration method in free electrolytes. An equilibrium model was developed for the characterization of electromigration curves which permitted the calculation of stability constants and ion mobilities of the complexes [AtI], [AtI₂]^–, [Attu]⁺, [Attu₂]⁺ and [AtItu] existing in these solutions. Ethanol and water served as solvents. The temperature was 298 K and the ionic strength was about 0.05 mol/dm³.     

Coherent low-frequency motions of hydrogen bonded acetic acid dimers in the liquid phase

Ultrafast vibrational dynamics of cyclic hydrogen bonded dimers and the underlying microscopic interactions are studied in temporally and spectrally resolved pump-probe experiments with 100 fs time resolution. Femtosecond excitation of the O-H and/or O-D stretching mode gives rise to pronounced changes of the O-H/O-D stretching absorption displaying both rate-like kinetic and oscillatory components. A lifetime of 200 fs is measured for the v=1 state of the O-H stretching oscillator. The strong oscillatory absorption changes are due to impulsively driven coherent wave packet motions along several low-frequency modes of the dimer between 50 and 170 cm(-1). Such wave packets generated via coherent excitation of the high-frequency O-H/O-D stretching oscillators represent a clear manifestation of the anharmonic coupling of low- and high-frequency modes. The underdamped low-frequency motions dephase on a time scale of 1-2 ps. Calculations of the vibrational potential energy surface based on density functional theory give the frequencies, anharmonic couplings, and microscopic elongations of the low-frequency modes, among them intermolecular hydrogen bond vibrations. Oscillations due to the excitonic coupling between the two O-H or O-D stretching oscillators are absent as is independently confirmed by experiments on mixed dimers with uncoupled O-H and O-D stretching oscillators.